A genome-wide RNAi screen reveals multiple regulators of caspase activation

A genome-wide RNAi screen reveals multiple regulators of caspase activation - List of Reported Hits by Dodzie Sogah

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Final Hit	HFA Amplicon	DRSC Amplicon	"S" Primer	"R" Primer	Amp. Length	Gene	19 bp Matches	CAR
Y	HFA00452	DRSC00452	GCACCGTCGTCGTGTG	TTTGTGCCCCAATGAGAGA	506	CG15438	0	No
Y	HFA02285	DRSC02285	GTGCAGCTCAACGTTGTG	CCCACGCCCATATGAACC	200	Pvf3	1	No
Y	HFA02448	DRSC02448	TATTTAACACATTTTTTATAGTCCTC	GACAAAAGGCCACTGGATC	427	CG15147	1	No
Y	HFA02651	DRSC02651	GATCGTCTGGGTGAGATGT	GGAACAAACGGCATCGGA	126	Pax	2	No
Y	HFA02981	DRSC02981	TGCTTGGTTATCTCCTTGTG	GAAGAAGGAGAAGCACAAGA	507	CG6712	0	No
Y	HFA03208	DRSC03208	CTGCCAACGTTGACCAGT	CCATGTCGTCGGGGATAAA	570	CG31674	1	No
Y	HFA03376	DRSC03376	GTATCGCACCTGGTGCTC	TTTGCGATCTCGTTGAGC	515	Myo31DF	1	No
Y	HFA03382	DRSC03382	CAGGAGGATCTGGAAGGTC	GGTGAGCTGCAACGGTC	259	nrv1	0	No
Y	HFA03557	DRSC03557	CGCAGTGAGTTCTTCAACA	GGCGATGTGCTCGTCTT	491	Pgant35A	1	No
Y	HFA03885	DRSC03885	TGGTTATTAAACTAATTAGAAAAATGA	ACAAATGCGCAGCAGAATT	280	CG30285	0	No
Y	HFA04291	DRSC04291	AATCCTCCGCTGGAAACC	CCGTTGCTGTACGAGACT	179	CG5591	0	No
Y	HFA04429	DRSC04429	CTCTATCTTTTCGATCTCCAC	CCACGGGTCCAATATCCAG	136	CG3894	0	No
Y	HFA04488	DRSC04488	GCCTCCGCGTCCAAGT	TTGACGGATTGCCACATCT	502	CG4781	0	No
Y	HFA06086	DRSC06086	TCGCTCATGTGAGCCTG	GCGGGCGTGAACATAGA	509	chn	1	No
Y	HFA06272	DRSC06272	TGGGTTTTTCTGGTGAAACAA	TGACGAAGCATATACAAGGATA	509	CG30069	0	No
Y	HFA06405	DRSC06405	TATGGATTGCCAGCCTGTC	CCGGTGGGCTTCGAGT	266	CG1358	0	No
Y	HFA07058	DRSC07058	GGAGTCGCCGAAGGGAA	CGCCATAGCTGCTATCAG	514	CG8029	0	No
Y	HFA07447	DRSC07447	GATGCAGCCACACGGTTA	GGCTCGCTGGATCTGAAC	503	Jra	0	No
Y	HFA08168	DRSC08168	TCTACCAACTGCAGACATCT	GCAGCTGTGGAAATAGAAGT	239	CG10858	0	No
Y	HFA08467	DRSC08467	AGTCAGTTTAAATCCTTGGCA	ACGAGTTGTCTCTCCAGTC	321	dyl	0	No
Y	HFA08659	DRSC08659	TAAATGCGGCTATCAAGTCC	ATCAACGAGGCCGAGTTC	139	Eip63F-1	0	No
Y	HFA09788	DRSC09788	CAGTTGACTTTCGAGGGGA	GAGATAGCTGTACCCCGTG	431	CG10725	0	No
Y	HFA09825	DRSC09825	TGTCTTAATCCACAGATTGTTTA	CGCCCCCAATATGATGGAC	508	CG11251	0	No
Y	HFA09867	DRSC09867	CCATGTCCGCCGGATCT	CCATGCAGCACTGCAATC	511	Ard1, CG42455	0	No
Y	HFA09988	DRSC09988	TTTGGATGCAGATCACAAATC	GTCATTCCAAAAAAGCGTCC	287	CG13380, CG4174	0	No
Y	HFA10224	DRSC10224	ATCGCAAATGGTCGTGTTC	GAGGATGAGGAGATGCTAAG	498	CG33696	0	No
Y	HFA10230	DRSC10230	GGGTCCTCGGCTATACAG	TCCACCTGGTCACATCTTTC	484	CG16959	0	No
Y	HFA10620	DRSC10620	AATCGTCGGTATAATGAGACC	TCAGCAACGGAGATGGATT	497	Edc3	4	No
Y	HFA10828	DRSC10828	ATAGAAACTGCAAGCCATAGA	AACTGAACCTGCCAAACACT	288	CG7375	0	No
Y	HFA11171	DRSC11171	CACCAGCTTCTGTTTGATGA	ACAACTTTGTGCGGATCAG	512	Galpha73B	0	No
Y	HFA11231	DRSC11231	CGGCAAAAGGGAAACATAAG	GAATGAGCCGCTGGGAG	504	Nc	0	No
Y	HFA11319	DRSC11319	TGGTATTTGATGCGGTAGGT	GGTTTCCGTCGTGCCATT	474	a10	0	No
Y	HFA11370	DRSC11370	TGCACCGACGAAGAAAAG	TGACGCTTATCAATTGCTATAA	512	mnd	0	No
Y	HFA11384	DRSC11384	TTCCGTTGATAAGATTAGTGAG	TCCTTCGAGGTGGACATCT	505	polo	2	No
Y	HFA11412	DRSC11412	CCGTCGCAGATCTCGTC	GCATCCTGGCCAAGTACTA	322	zetaCOP	0	No
Y	HFA11641	DRSC11641	CAACGGCTGCCAGTGG	CCACGGAATGTCCCCCTA	497	CG11241	0	No
Y	HFA12199	DRSC12199	TCCGGCGCCGTCATC	ACCTTGCAGAGGTCTATGG	506	CG12170	0	No
Y	HFA12280	DRSC12280	CGCTAATCACGCTTCTCA	GAATGCTTGGCAGCCATTC	506	CG15594	0	No
Y	HFA12387	DRSC12387	GGAATGGGGGCTGCATG	ACGACGAGCTGAAGCAC	508	sec23	0	No
Y	HFA12559	DRSC12559	TTCGCTCCTGCAGACTTC	AACCGCATCGACCTTACC	334	sunz	0	No
Y	HFA14509	DRSC14509	ACCAGACAGAAAACAGGAAAA	CGCCAATTTGGAGGACAG	188	pyd	0	No
Y	HFA14960	DRSC14960	CCCCCTTTCAGCGTATCA	CCGCCAGTGCCTGTCT	508	CG14740	0	No
Y	HFA15058	DRSC15058	TTGAGTTCCTTCTGTCCCTT	CCAAAAGAAAGCCAGTGGTC	216	capa	0	No
Y	HFA15307	DRSC15307	GTTGCCGGACTTGTCCAC	TGAAGCCGCCCAATTCC	326	CG18139, Hmx	0	No
Y	HFA15795	DRSC15795	CCACCCGTGCAGTGTCA	GACATTGACGGGGACAATCT	507	Miro	0	No
Y	HFA16312	DRSC16312	GCGTGGCGAAGACGTAC	ATCATTGGCGAGGAGGGT	566	CG7789	0	No
Y	HFA17013	DRSC17013	TCCTTGCTCACCACCCAG	TCCGCCCTGAATTCCCA	512	neur	0	No

Select Columns To Display:
Assay Plate Information
Details ?
Results Information
Raw
Phenotype
Final Hit ?
Amplicon Information
HFA Amplicon ID ?
DRSC Amplicon ID ?
"S" Primer ?
"R" Primer ?
Amplicon Length(s) ?
Hits in Public Screens ?
Chromosomal Location Information
Number of Chromosome Locations ?
Chromosome Locations ?
Chromosome ?
Chromosome Start ?
Chromosome Stop ?
Gene Information
Gene Symbol ?
Flybase Gene ID ?
Deprecated Flybase Gene IDs ?
Gene Name ?
Gene Synonyms ?
NCBI Nucleotide Accessions ?
Entrez Gene / LocusLink Identifiers ?
UniGene Identifiers ?
RefSeq RNA Accessions ?
HomoloGene Group Identifiers ?
Homo sapiens Gene(s) via Homologene ?
Mus musculus Gene(s) via Homologene ?
Caenorhabditis elegans Gene(s) via Homologene ?
Saccharomyces cerevisiae Gene(s) via Homologene ?
Homo sapiens Putative Orthologues According to InParanoid ?
Mus musculus Putative Orthologues According to InParanoid ?
Caenorhabditis elegans Putative Orthologues According to InParanoid ?
Saccharomyces cerevisiae Putative Orthologues According to InParanoid ?
Misc. Organism Putative Orthologues According to InParanoid ?
Homophila - Possible Human Disease Homologs ?
Gene Ontology ?
Protein Domains ?
Potential Off-Target Effect Information
Number of Potential Off-Targets Based On 17 bp Matches ?
Number of Potential Off-Targets Based On 19 bp Matches ?
Number of Potential Off-Targets Based On 21 bp Matches ?
Number of Potential Off-Targets Based On 23 bp Matches ?
Number of Potential Off-Targets Based On 25 bp Matches ?
CAR Repeats ?
CAN Repeats ?

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