A genome-wide RNA interference screen identifies putative chromatin regulators essential for E2F repression

A genome-wide RNA interference screen identifies putative chromatin regulators essential for E2F repression - List of Reported Hits by Jianrong Lu

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Final Hit	HFA Amplicon	DRSC Amplicon	"S" Primer	"R" Primer	Amp. Length	Gene	19 bp Matches	CAR
Y	HFA02552	DRSC02552	AACATGCGCTCCAGATAGT	CAGACTCCTACCTCGTTTTG	515	Sfmbt	1	No
Y	HFA02765	DRSC02765	GCTTTGAAACACCTTGTCATT	CCAAGCCTGCAGTCAAAAA	574	YL-1	2	No
Y	HFA04360	DRSC04360	CTATCACAGGCTTTTTGCTC	ACCAGTGACGCACTTTAATC	512	CG3363	0	No
Y	HFA04558	DRSC04558	TTCCGTCTTGCATCGTTTT	ATAAATCTAGAGACGTTAAACCT	511	dom	2	No
Y	HFA07088	DRSC07088	GGATTCATGGACGTCGACT	ATGTCGCCGCGTCACA	509	dup	0	No
Y	HFA10563	DRSC10563	CACGATCTGTGAGATCCAAA	CCCTCACGCAACAAATACC	514	Cdc6	0	No
Y	HFA11219	DRSC11219	CCTGCTTTGGCTATCGAAA	CATCTGTATCAACAAGAACGAC	510	Mcm7	1	No
Y	HFA11848	DRSC11848	TTTGCTTCCCGGTTTGGG	CAAGTGCGGCACTTGTTC	508	pzg	0	No
Y	HFA12506	DRSC12506	CACAGCAGTTCGTGCCC	ATTGCTCGCCGGCTAAA	506	gfzf	0	No
Y	HFA14527	DRSC14527	CGCTCCACGTGTTTATGA	CGTGCTATTTGAATTGAACAA	519	CG12538	24	No
Y	HFA14866	DRSC14866	TTCGTGGGTGGCGATCC	AGCAGGGTGTAGACGAAG	520	Brd8	2	No
Y	HFA15283	DRSC15283	CAGGAGCTGGTTGATAATCT	TTGAATGACCTGCTTAACGA	501	Xrp1	1	No
Y	HFA16566	DRSC16566	GCAGCCAAATTGCTTGTCC	AGACGGTGAAGACGCCC	515	CG9797	1	No
Y	HFA16983	DRSC16983	GGCGGGTCCGTGGAAA	CATCAAGGCGGAATCTCTG	496	l(3)mbt	1	No
Y	HFA18429	DRSC18429	CAACTCCTTCATTATCCTATCC	CACACCAGGCAGTCACTAT	571	l(1)G0148	1	No
Y	HFA18704	DRSC18704	GGCGGAGGCGATCATTT	AAGCTGGCGAAGAGGTAA	482	Rbf	2	No
Y	HFA18770	DRSC18770	TTTTGAATGGTGTAGTAGGAGT	CCAAACCTTCGTCAAGAACA	518	east	3	No
Y	HFA21138	DRSC21138	TGTTATGCGAGCACAGAAG	ACAAGTCTGAAAATTATCCAGG	513	Yeti	0	No

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Gene Information
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Deprecated Flybase Gene IDs ?
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Gene Synonyms ?
NCBI Nucleotide Accessions ?
Entrez Gene / LocusLink Identifiers ?
UniGene Identifiers ?
RefSeq RNA Accessions ?
HomoloGene Group Identifiers ?
Homo sapiens Gene(s) via Homologene ?
Mus musculus Gene(s) via Homologene ?
Caenorhabditis elegans Gene(s) via Homologene ?
Saccharomyces cerevisiae Gene(s) via Homologene ?
Homo sapiens Putative Orthologues According to InParanoid ?
Mus musculus Putative Orthologues According to InParanoid ?
Caenorhabditis elegans Putative Orthologues According to InParanoid ?
Saccharomyces cerevisiae Putative Orthologues According to InParanoid ?
Misc. Organism Putative Orthologues According to InParanoid ?
Homophila - Possible Human Disease Homologs ?
Gene Ontology ?
Protein Domains ?
Potential Off-Target Effect Information
Number of Potential Off-Targets Based On 17 bp Matches ?
Number of Potential Off-Targets Based On 19 bp Matches ?
Number of Potential Off-Targets Based On 21 bp Matches ?
Number of Potential Off-Targets Based On 23 bp Matches ?
Number of Potential Off-Targets Based On 25 bp Matches ?
CAR Repeats ?
CAN Repeats ?

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